Publications

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2017

1.

Jörg Wicker, Stefan Kramer

The Best Privacy Defense is a Good Privacy Offense: Obfuscating a Search Engine User's Identity Journal Article Forthcoming

Data Mining and Knowledge Discovery, Forthcoming, (Accepted).

BibTeX | Tags: adversarial learning, data mining, privacy, reinforcement learning, serch engines

2.

Diogo Latino, Jörg Wicker, Martin Gütlein, Emanuel Schmid, Stefan Kramer, Kathrin Fenner

Eawag-Soil in enviPath: a new resource for exploring regulatory pesticide soil biodegradation pathways and half-life data Journal Article

Environmental Science: Process & Impact, 2017.

Abstract | Links | BibTeX | Altmetric | Tags: biodegradation, cheminformatics, computational sustainability, enviPath, metabolic pathways

2016

3.

Atif Raza, Jörg Wicker, Stefan Kramer

Trading Off Accuracy for Efficiency by Randomized Greedy Warping Inproceedings

Proceedings of the 31st Annual ACM Symposium on Applied Computing, pp. 883-890, ACM, New York, NY, USA, 2016, ISBN: 978-1-4503-3739-7.

Abstract | Links | BibTeX | Altmetric | Tags: data mining, dynamic time warping, time series

4.

Jonathan Williams, Christof Stönner, Jörg Wicker, Nicolas Krauter, Bettina Derstorff, Efstratios Bourtsoukidis, Thomas Klüpfel, Stefan Kramer

Cinema audiences reproducibly vary the chemical composition of air during films, by broadcasting scene specific emissions on breath Journal Article

Scientific Reports, 6 , 2016.

Abstract | Links | BibTeX | Altmetric | Tags: breath analysis, causality, cinema data mining, data mining, emotional response analysis, movie analysis, smell of fear, time series

5.

Jörg Wicker, Kathrin Fenner, Stefan Kramer

A Hybrid Machine Learning and Knowledge Based Approach to Limit Combinatorial Explosion in Biodegradation Prediction Incollection

Lässig, Jörg; Kersting, Kristian; Morik, Katharina (Ed.): Computational Sustainability, pp. 75-97, Springer International Publishing, Cham, 2016, ISBN: 978-3-319-31858-5.

Abstract | Links | BibTeX | Altmetric | Tags: biodegradation, cheminformatics, computational sustainability, enviPath, machine learning, metabolic pathways, multi-label classification

6.

Jörg Wicker, Andrey Tyukin, Stefan Kramer

A Nonlinear Label Compression and Transformation Method for Multi-Label Classification using Autoencoders Inproceedings

Bailey, James; Khan, Latifur; Washio, Takashi; Dobbie, Gill; Huang, Zhexue Joshua; Wang, Ruili (Ed.): The 20th Pacific Asia Conference on Knowledge Discovery and Data Mining (PAKDD), pp. 328-340, Springer International Publishing, Switzerland, 2016, ISBN: 978-3-319-31753-3.

Abstract | Links | BibTeX | Altmetric | Tags: autoencoders, machine learning, maniac, multi-label classification

7.

Jörg Wicker, Tim Lorsbach, Martin Gütlein, Emanuel Schmid, Diogo Latino, Stefan Kramer, Kathrin Fenner

enviPath - The Environmental Contaminant Biotransformation Pathway Resource Journal Article

Nucleic Acid Research, 44 (D1), pp. D502-D508, 2016.

Abstract | Links | BibTeX | Altmetric | Tags: biodegradation, cheminformatics, computational sustainability, enviPath, linked data, metabolic pathways, multi-label classification

2015

8.

Andrey Tyukin, Stefan Kramer, Jörg Wicker

Scavenger - A Framework for the Efficient Evaluation of Dynamic and Modular Algorithms Inproceedings

Bifet, Albert; May, Michael; Zadrozny, Bianca; Gavalda, Ricard; Pedreschi, Dino; Cardoso, Jaime; Spiliopoulou, Myra (Ed.): Machine Learning and Knowledge Discovery in Databases, pp. 325-328, Springer International Publishing, 2015, ISBN: 978-3-319-23460-1.

Abstract | Links | BibTeX | Altmetric | Tags: autoencoders, distributed processing, framework, large-scale, Scavenger

9.

Jörg Wicker, Nicolas Krauter, Bettina Derstorff, Christof Stönner, Efstratios Bourtsoukidis, Thomas Klüpfel, Jonathan Williams, Stefan Kramer

Cinema Data Mining: The Smell of Fear Inproceedings

Proceedings of the 21st ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, pp. 1235-1304, ACM ACM, New York, NY, USA, 2015, ISBN: 978-1-4503-3664-2.

Abstract | Links | BibTeX | Altmetric | Tags: atmospheric chemistry, breath analysis, causality, cinema data mining, data mining, emotional response analysis, movie analysis, smell of fear, time series

2014

10.

Andrey Tyukin, Stefan Kramer, Jörg Wicker

BMaD - A Boolean Matrix Decomposition Framework Inproceedings

Calders, Toon; Esposito, Floriana; Hüllermeier, Eyke; Meo, Rosa (Ed.): Machine Learning and Knowledge Discovery in Databases, pp. 481-484, Springer Berlin Heidelberg, 2014, ISBN: 978-3-662-44844-1.

Abstract | Links | BibTeX | Altmetric | Tags: BMaD, Boolean matrix decomposition, data mining, framework, modular

2013

11.

Jörg Wicker

Large Classifier Systems in Bio- and Cheminformatics PhD Thesis

Technische Universität München, 2013.

Abstract | Links | BibTeX | Tags: biodegradation, bioinformatics, cheminformatics, computational sustainability, data mining, machine learning, metabolic pathways, multi-label classification, multi-relational learning, OpenTox, predictive toxicology

2012

12.

Jörg Wicker, Bernhard Pfahringer, Stefan Kramer

Multi-label Classification Using Boolean Matrix Decomposition Inproceedings

Proceedings of the 27th Annual ACM Symposium on Applied Computing, pp. 179–186, ACM, Trento, Italy, 2012, ISBN: 978-1-4503-0857-1.

Abstract | Links | BibTeX | Altmetric | Tags: associations, BMaD, Boolean matrix decomposition, machine learning, multi-label classification

2010

13.

Barry Hardy, Nicki Douglas, Christoph Helma, Micha Rautenberg, Nina Jeliazkova, Vedrin Jeliazkov, Ivelina Nikolova, Romualdo Benigni, Olga Tcheremenskaia, Stefan Kramer, Tobias Girschick, Fabian Buchwald, Jörg Wicker, Andreas Karwath, Martin Gütlein, Andreas Maunz, Haralambos Sarimveis, Georgia Melagraki, Antreas Afantitis, Pantelis Sopasakis, David Gallagher, Vladimir Poroikov, Dmitry Filimonov, Alexey Zakharov, Alexey Lagunin, Tatyana Gloriozova, Sergey Novikov, Natalia Skvortsova, Dmitry Druzhilovsky, Sunil Chawla, Indira Ghosh, Surajit Ray, Hitesh Patel, Sylvia Escher

Collaborative development of predictive toxicology applications Journal Article

Journal of Cheminformatics, 2 (1), pp. 7, 2010, ISSN: 1758-2946.

Abstract | Links | BibTeX | Altmetric | Tags: cheminformatics, framework, linked data, OpenTox, predictive toxicology

14.

Jörg Wicker, Kathrin Fenner, Lynda Ellis, Larry Wackett, Stefan Kramer

Predicting biodegradation products and pathways: a hybrid knowledge- and machine learning-based approach Journal Article

Bioinformatics, 26 (6), pp. 814-821, 2010.

Abstract | Links | BibTeX | Altmetric | Tags: biodegradation, cheminformatics, computational sustainability, enviPath, machine learning

15.

Jörg Wicker, Lothar Richter, Stefan Kramer

SINDBAD and SiQL: Overview, Applications and Future Developments Incollection

Džeroski, Sašo; Goethals, Bart; Panov, Panče (Ed.): Inductive Databases and Constraint-Based Data Mining, pp. 289-309, Springer New York, 2010, ISBN: 978-1-4419-7737-3.

Abstract | Links | BibTeX | Altmetric | Tags: cinema data mining, inductive databases, machine learning, SINDBAD

2008

16.

Lothar Richter, Jörg Wicker, Kristina Kessler, Stefan Kramer

An Inductive Database and Query Language in the Relational Model Inproceedings

Proceedings of the 11th International Conference on Extending Database Technology: Advances in Database Technology, pp. 740–744, ACM, Nantes, France, 2008, ISBN: 978-1-59593-926-5.

Abstract | Links | BibTeX | Altmetric | Tags: data mining, inductive databases, machine learning, query languages, SINDBAD

17.

Jörg Wicker, Kathrin Fenner, Lynda Ellis, Larry Wackett, Stefan Kramer

Machine Learning and Data Mining Approaches to Biodegradation Pathway Prediction Inproceedings

Bridewell, Will; Calders, Toon; de Medeiros, Ana Karla; Kramer, Stefan; Pechenizkiy, Mykola; Todorovski, Ljupco (Ed.): Proceedings of the Second International Workshop on the Induction of Process Models at ECML PKDD 2008, 2008.

Links | BibTeX | Tags: biodegradation, cheminformatics, computational sustainability, data mining, enviPath, machine learning, metabolic pathways

18.

Jörg Wicker, Lothar Richter, Kristina Kessler, Stefan Kramer

SINDBAD and SiQL: An Inductive Database and Query Language in the Relational Model Inproceedings

Daelemans, Walter; Goethals, Bart; Morik, Katharina (Ed.): Machine Learning and Knowledge Discovery in Databases, pp. 690-694, Springer Berlin Heidelberg, 2008, ISBN: 978-3-540-87480-5.

Abstract | Links | BibTeX | Altmetric | Tags: data mining, inductive databases, machine learning, query languages, SINDBAD

19.

Jörg Wicker, Christoph Brosdau, Lothar Richter, Stefan Kramer

SINDBAD SAILS: A service architecture for inductive learning schemes Inproceedings

Proceedings of the First Workshop on Third Generation Data Mining: Towards Service-Oriented Knowledge Discovery, 2008.

Abstract | BibTeX | Tags: data mining, inductive databases, linked data, machine learning, query languages, SINDBAD

2006

20.

Stefan Kramer, Volker Aufschild, Andreas Hapfelmeier, Alexander Jarasch, Kristina Kessler, Stefan Reckow, Jörg Wicker, Lothar Richter

Inductive Databases in the Relational Model: The Data as the Bridge Inproceedings

Bonchi, Francesco; Boulicaut, Jean-François (Ed.): Knowledge Discovery in Inductive Databases, pp. 124-138, Springer Berlin Heidelberg, 2006, ISBN: 978-3-540-33292-3.

Abstract | Links | BibTeX | Altmetric | Tags: data mining, inductive databases, machine learning, query languages, SINDBAD